Plant biochemistry
Some basic information about the module
Cycle of education: 2022/2023
The name of the faculty organization unit: The faculty Chemistry
The name of the field of study: Biotechnology
The area of study: technical sciences
The profile of studing:
The level of study: first degree study
Type of study: full time
discipline specialities : Applied biochemistry, Purification and analysis of biotechnological products
The degree after graduating from university: Bachelor of Science (BSc)
The name of the module department : Department of Biochemistry and Bioinformatics
The code of the module: 10320
The module status: mandatory for the speciality Applied biochemistry
The position in the studies teaching programme: sem: 5 / W15 L15 / 2 ECTS / Z
The language of the lecture: Polish
The name of the coordinator 1: Prof. Mirosław Tyrka, DSc, PhD, Eng.
The name of the coordinator 2: Piotr Dziadczyk, PhD, Eng.
semester 5: Ewa Ciszkowicz, PhD
The aim of studying and bibliography
The main aim of study: Familiarize students with the biochemical processes in plants important for the industry
The general information about the module: Students become familiar with biological transformations of selected chemical compounds and become acquainted with selected biochemical processes in plants
Teaching materials: aktualne prace przeglądowe
Bibliography required to complete the module
| 1 | Heldt H-W, Piechulla B | Plant Biochemistry | Elsvevier Academic Press. | 2011 |
Basic requirements in category knowledge/skills/social competences
Formal requirements: Valid registration
Basic requirements in category knowledge: Basic knowledge of cell biology, biochemistry and microbiology
Basic requirements in category skills: Self-education skills. Ability to work in a laboratory under teacher supervision.
Basic requirements in category social competences: Self-education skills. Ability to work in a laboratory under teacher supervision.
Module outcomes
| MEK | The student who completed the module | Types of classes / teaching methods leading to achieving a given outcome of teaching | Methods of verifying every mentioned outcome of teaching | Relationships with KEK | Relationships with PRK |
|---|---|---|---|---|---|
| 01 | Metabolism of the cell of the leaf. Photosynthesis. CO2 assimilation. Photorespiration. Biosynthesis and transport of carbohydrates. Assimilation and binding nitrogen compounds and sulfur. Transport of assimilation products. Ecological functions of secondary metabolites and isoprenoid. Regulation of growth and organ development. The interaction of plant genomes. Biosynthesis of proteins in plants. | Lecture | Written exam |
K_W05+++ K_W06+ K_W14+ |
P6S_WG |
| 02 | Study of variation in genes determining biochemical changes in plants. | Classes | test, observation of performance, written report |
K_W06++ K_U09++ K_U18+ K_K03++ |
P6S_KR P6S_UO P6S_UW P6S_WG |
Attention: Depending on the epidemic situation, verification of the achieved learning outcomes specified in the study program, in particular credits and examinations at the end of specific classes, can be implemented remotely (real-time meetings).
The syllabus of the module
| Sem. | TK | The content | realized in | MEK |
|---|---|---|---|---|
| 5 | TK01 | Wykłady1-15 | MEK01 | |
| 5 | TK02 | Laboratoria | MEK02 |
The student's effort
| The type of classes | The work before classes | The participation in classes | The work after classes |
|---|---|---|---|
| Lecture (sem. 5) | contact hours:
15.00 hours/sem. |
Others:
8.00 hours/sem. |
|
| Laboratory (sem. 5) | The preparation for a Laboratory:
3.00 hours/sem. The preparation for a test: 5.00 hours/sem. |
contact hours:
15.00 hours/sem. |
|
| Advice (sem. 5) | |||
| Credit (sem. 5) | The preparation for a Credit:
12.00 hours/sem. |
The written credit:
1.00 hours/sem. |
The way of giving the component module grades and the final grade
| The type of classes | The way of giving the final grade |
|---|---|
| Lecture | The grade is issued on the basis of written exam results. |
| Laboratory | The grade is issued on the basis of average grade of raport (50%) and final test (50%). |
| The final grade | Laboratory grade (30%) and evaluation of the lectures (70%) |
Sample problems
Required during the exam/when receiving the credit
(-)
Realized during classes/laboratories/projects
(-)
Others
(-)
Can a student use any teaching aids during the exam/when receiving the credit : no
The contents of the module are associated with the research profile: yes
| 1 | B. Bakera; M. Rakoczy-Trojanowska; M. Szeliga; M. Święcicka; M. Tyrka | Identification of candidate genes responsible for chasmogamy in wheat | 2023 |
| 2 | P. Bednarek; A. Dorczyk; T. Drzazga; D. Jasińska; P. Krajewski; B. Ługowska; R. Martofel; P. Matysik; M. Niewińska; D. Ratajczak; K. Rączka; T. Sikora; D. Tyrka; M. Tyrka; E. Witkowski; U. Woźna-Pawlak | Genome-wide association mapping in elite winter wheat breeding for yield improvement | 2023 |
| 3 | M. Dyda; G. Gołębiowska; M. Rapacz; M. Szechyńska-Hebda; M. Tyrka; I. Wąsek; M. Wędzony | Quantitative trait loci and candidate genes associated with freezing tolerance of winter triticale (× Triticosecale Wittmack) | 2022 |
| 4 | M. Dyda; G. Gołębiowska; M. Rapacz; M. Tyrka; M. Wędzony | Genetic mapping of adult-plant resistance genes to powdery mildew in triticale | 2022 |
| 5 | M. Dyda; G. Gołębiowska; M. Rapacz; M. Tyrka; M. Wędzony | Mapping of QTL and candidate genes associated with powdery mildew resistance in triticale (× Triticosecale Wittm.) | 2022 |
| 6 | P. Krajewski; R. Marcinkowski; R. Martofel; P. Matysik; M. Mokrzycka; M. Rakoczy-Trojanowska; M. Rokicki; S. Stojałowski; M. Tyrka; U. Woźna-Pawlak; B. Żmijewska | Genome-Wide Association Analysis for Hybrid Breeding in Wheat | 2022 |
| 7 | A. Pietrusińska; M. Tyrka | Linkage of Lr55 wheat leaf rust resistance gene with microsatellite and DArT-based markers | 2021 |
| 8 | B. Bakera; P. Krajewski; M. Mokrzycka; M. Rakoczy-Trojanowska; M. Szeliga; M. Święcicka; M. Tyrka | Identification of Rf Genes in Hexaploid Wheat (Triticumaestivum L.) by RNA-Seq and Paralog Analyses | 2021 |
| 9 | B. Bakera; P. Krajewski; P. Matysik; M. Mokrzycka; M. Rakoczy-Trojanowska; M. Rokicki; S. Stojałowski; M. Szeliga; D. Tyrka; M. Tyrka | Evaluation of genetic structure in European wheat cultivars and advanced breeding lines using high-density genotyping-by-sequencing approach | 2021 |
| 10 | J. Buczkowicz; T. Drzazga; B. Ługowska; P. Matysik; K. Rubrycki; M. Semik; D. Tyrka; M. Tyrka; E. Witkowski | Identyfikacja efektywnych genów odporności na wybrane choroby wirusowe i grzybowe pszenicy zwyczajnej | 2021 |
| 11 | J. Buczkowicz; T. Drzazga; G. Fic; M. Jaromin; P. Krajewski; P. Matysik; R. Mazur; P. Milczarski; T. Sikora; M. Szeliga; D. Tyrka; M. Tyrka; E. Witkowski | Selekcja genomowa pszenicy ozimej | 2021 |
| 12 | E. Ciszkowicz; E. Kaznowska; P. Porzycki; M. Semik; M. Tyrka | MiR-93/miR-375: Diagnostic Potential, Aggressiveness Correlation and Common Target Genes in Prostate Cancer | 2020 |
| 13 | G. Czajowski; M. Karbarz; M. Pojmaj; A. Strzembicka; D. Tyrka; M. Tyrka; A. Wardyńska; M. Wędzony | Quantitative trait loci mapping of adult-plant resistance to powdery mildew in triticale | 2020 |
| 14 | J. Ciura; M. Szeliga; M. Tyrka | Representational Difference Analysis of Transcripts Involved in Jervine Biosynthesis | 2020 |
| 15 | J. Ciura; M. Grzesik; M. Szeliga; M. Tyrka | Identification of candidate genes involved in steroidal alkaloids biosynthesis in organ-specific transcriptomes of Veratrum nigrum L. | 2019 |
| 16 | M. Dyda; M. Szechyńska-Hebda; M. Tyrka; I. Wąsek; M. Wędzony | Local and systemic regulation of PSII efficiency in triticale infected by the hemibiotrophic pathogen Microdochium nivale | 2019 |
| 17 | M. Dziurka; K. Hura; T. Hura; A. Ostrowska; M. Tyrka | Participation of Wheat and Rye Genome in Drought Induced Senescence in Winter Triticale (X Triticosecale Wittm.) | 2019 |
| 18 | Z. Banaszak; A. Fiust; Z. Nita; W. Orłowska-Job; M. Pojmaj; M. Rapacz; M. Tyrka; M. Wójcik-Jagła | Sposób selekcji mrozoodpornych genotypów jęczmienia ozimego | 2019 |