The aim of studying and bibliography

The main aim of study: Review of the selected aspects of analysis and usage of the information about structure of large biomolecules in understanding of biochemical and biotechnological processes.

The general information about the module: Module consists of 15 hours of lectures and 20 hours of project classes.

others: Aktualne publikacje naukowe z zakresu biotechnologii, biologii strukturalnej.

Bibliography required to complete the module

Bibliography used during lectures

1	Andreas Liljas, Lars Liljas, Jure Piskur, Goran Lindblom, Poul Nissen, Morten Kjelgaard	Textbook of structural biology	World Scientific Publishing Co. Pte. Ltd..	2011
2	Gale Rhodes	Crystallography Made Crystal Clear	Academic Press.	2006

Basic requirements in category knowledge/skills/social competences

Formal requirements: Valid student registration.

Basic requirements in category knowledge: Knowledge of biochemistry, enzymology, physical chemistry.

Basic requirements in category skills: Ability to independently acquire and critically evaluate scientific information.

Basic requirements in category social competences: Ability to work individually and in team.

Module outcomes

MEK	The student who completed the module	Types of classes / teaching methods leading to achieving a given outcome of teaching	Methods of verifying every mentioned outcome of teaching	Relationships with KEK	Relationships with PRK
01	Knows the structure and methods used to determine structure of large biomacromolecules.	Lecture	Written test	K_W06+++	P7S_WG
02	is able to retrieve, visualize and analyse structural data for selected biomolecules.	Lecture, individual/group project	Written test, work progress monitoring, project presentation.	K_W02+++ K_K02+++	P7S_KR P7S_WG
03	Understands functions performed by selected biomolecules in progress and regulation of biological processes.	Lecture, individual/group project	Written test, project progress monitoring, project presentation	K_W02+++ K_U02+++	P7S_UK P7S_WG

Attention: Depending on the epidemic situation, verification of the achieved learning outcomes specified in the study program, in particular credits and examinations at the end of specific classes, can be implemented remotely (real-time meetings).

The syllabus of the module

Sem.	TK	The content	realized in	MEK
2	TK01	Introduction to structural biology (protein, nucleic acid, lipid bi-layers and enzyme structure).	W01-03	MEK01
2	TK02	Methods used for determination of biomolecules. Molecular modeling: molecular mechanics.	W04-06	MEK01
2	TK03	Molecular modeling: molecular dynamics. Retrieval and analysis of structural data.	W07-09	MEK01 MEK02
2	TK04	Application of structural information in research and industrial practice.	W10-12	MEK01 MEK03
2	TK05	Biomolecules structure and function prediction.	W13-15	MEK01 MEK02 MEK03
2	TK06	Application of structural data in solution of selected biotechnological problem.	P01-20	MEK01 MEK02 MEK03

The student's effort

The type of classes	The work before classes	The participation in classes	The work after classes
Lecture (sem. 2)	The preparation for a test: 8.00 hours/sem.	contact hours: 15.00 hours/sem.	complementing/reading through notes: 4.00 hours/sem. Studying the recommended bibliography: 4.00 hours/sem.
Project/Seminar (sem. 2)	The preparation for projects/seminars: 4.00 hours/sem.	contact hours: 20.00 hours/sem..	Doing the project/report/ Keeping records: 8.00 hours/sem. The preparation for the presentation: 4.00 hours/sem.
Advice (sem. 2)	The preparation for Advice: 2.00 hours/sem.	The participation in Advice: 2.00 hours/sem.
Credit (sem. 2)	The preparation for a Credit: 8.00 hours/sem.	The written credit: 2.00 hours/sem.

The way of giving the component module grades and the final grade

The type of classes	The way of giving the final grade
Lecture	The note is issued to students who participated in all classes (in accordance with the Study Regulations) and who: passed the colloquium (for the full-time teaching mode) or who have completed and presented the elaboration of a selected problem in the form of a presentation (for the distance learning mode) in the form of a presentation. When assessing the grade, the substantive level of the presentation and activity during classes will be taken into account.
Project/Seminar	Pass note is granted to the students who participated in all exercises and presented report based on performed exercises.
The final grade	The final note is an average of all notes collected from the module: K=a*wA+c*wC+l*wL (a-lecture coeff., c-tutorial coeff., l-laboratory coeff., w=1,0, w=0,9, w=0,8 receptively for the 1st, 2nd, 3rd attempt). The note is calculated only if all components have been passed. Values of coefficients are presented to the students during the initial teaching session.

Sample problems

Required during the exam/when receiving the credit
(-)

Realized during classes/laboratories/projects
(-)

Others
(-)

Can a student use any teaching aids during the exam/when receiving the credit : no

The contents of the module are associated with the research profile: no